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Record YOLO duplicate suppression calibration
2026-07-09 11:02:33 +02:00

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GeoIntel TODO

This file now starts with the current implementation status. Older preparation/backlog sections are preserved below as historical planning context and should not be treated as the live sprint board without checking docs/CODEX_EXECUTION_LOG.md.

Release hardening status

  • Remove Python datetime.utcnow() deprecation warnings from backend service paths.
  • Split frontend production build into app, React vendor and MapLibre vendor chunks.
  • Enforce Python deprecation warnings as release-readiness failures.
  • Fix Docker backend package install order and remove mandatory root .env dependency.
  • Add Docker build context ignores for backend and frontend.
  • Run Docker/PostGIS live validation on Tower/Unraid.
  • Add Unraid Compose template assets with editable ports, storage path and app icon.
  • Add single-container Unraid runtime with embedded PostGIS, backend and frontend.
  • Remove embedded PostGIS password defaults from all-in-one Docker image metadata.
  • Report reused-volume PostgreSQL collation mismatches in live migration smoke.
  • Execute Tower PostgreSQL collation reindex/refresh after backup.

Current implementation status

  • Backend FastAPI foundation, health endpoint and service structure.
  • React/TypeScript frontend foundation and MapLibre workbench.
  • Map layer visibility, opacity and feature property inspection.
  • Selected project area/AOI map overlay with visibility and opacity controls.
  • SQLAlchemy/PostGIS ORM models and Alembic migration chain through Sprint 9.
  • Dataset upload, storage metadata and vector feature persistence.
  • Raster metadata and raster operation service boundaries.
  • Vector operation service boundaries and fixture-backed tests.
  • Provider registry skeleton for GRB, OSM, manual and fixture providers.
  • Detection Lab foundation, persistence, GeoJSON output and QA integration.
  • Configured-YOLO optional dependency strategy and local preflight.
  • Segmentation Lab foundation, persistence, GeoJSON output and QA integration.
  • QA/QC golden benchmark fixtures and script.
  • Run QA/QC golden benchmark from the main readiness gate.
  • Verify browser-facing demo QA/QC metrics against the golden baseline.
  • Explicit offline demo workflow seed for project, AOI, fixture datasets and persisted QA metrics.
  • Project-scoped QA/QC result listing and frontend QA/QC Results panel.
  • Persisted export foundation for vector/detection/segmentation GeoJSON and project metadata JSON.
  • Lightweight HTML project report artifact export.
  • V1 readiness handoff summary in project metadata/report exports.
  • Browser-facing demo/export workflow smoke script with connected V1 state checks.
  • Compact V1 workbench status strip for project, AOI, datasets, map, QA/QC and exports.
  • Dry-run-first demo export artifact cleanup tooling.
  • Browser-facing default workbench state smoke for the offline demo project.
  • Browser-facing workbench interaction backing-state smoke and stable UI test anchors.
  • Backend API contract audit comparing implemented FastAPI routes with docs/API_CONTRACTS.md.
  • Live Docker/PostGIS validation on Tower/Unraid.
  • Real YOLO compatibility smoke with optional AI extras and local model file.
  • Detection and segmentation workflow hook extraction beyond Sprint 10.
  • Export and QA/QC workflow hook extraction beyond Sprint 10.
  • Dataset, raster and vector workflow hook extraction beyond Sprint 10.
  • Dataset detail, raster controls and vector controls component decomposition.
  • QA/QC results and map workspace component decomposition.
  • Docker Compose port/storage/database configuration via .env defaults for Unraid.
  • Single-container geointel Unraid compose/template runtime.
  • Export preview component decomposition and HTML report download-only UX hardening.
  • Provider, change-detection and map-workspace orchestration hook decomposition.
  • Project/area/dataset cross-load orchestration hook decomposition.
  • Demo workflow orchestration hook decomposition.
  • Final App.tsx import/encoding cleanup and size audit.
  • Optional final bootstrap-effect extraction.
  • Decide next V1 stabilization focus: golden dataset expansion or frontend visual polish backlog.
  • Expand golden QA/QC benchmark coverage across partial, perfect, no-overlap and MultiPolygon scenarios.
  • Improve workbench shell visual polish, mobile navigation density and AI result readability.
  • Improve Map workspace layer provenance, empty guidance and selected-feature summary readability.
  • Add Data/Map mobile visual polish for upload forms, action grids and map toolbar density.
  • Add AI Labs mobile visual polish for model cards, lab forms and result tables.
  • Add Export/System mobile visual polish for export actions and provider capability cards.
  • Add inspector mobile polish for dataset metadata, raster/vector tools and action groups.
  • Add export preview readability polish for large JSON/GeoJSON handoff artifacts.
  • Add accessibility focus polish for primary workbench keyboard navigation.
  • Add raster/vector operation form readability polish for dense tool panels.
  • Add compact loading/error/empty/result state polish across QA, exports and AI labs.
  • Add compact shell density polish for topbar context, mobile navigation and workspace skip flow.
  • Add Overview workspace panel hierarchy polish for readiness and recommended-action regions.
  • Add Data workspace selected-summary and panel density polish.
  • Add Map workspace panel hierarchy and layer-control density polish.
  • Add selected map feature extraction with highlight, property table, copy and GeoJSON download.
  • Add operational GIS map workflow with road basemap, persisted database layer selection and AOI/layer vector_features query run.
  • Add basemap policy notice and guided GIS query-to-QA/export workflow in the Map workspace.
  • Add reusable latest-result mode for repeated Map QA/QC runs without duplicate derived artifacts.
  • Add opt-in Docker/Unraid AI build/runtime path for local PyTorch/Ultralytics YOLO operation.
  • Surface configured-YOLO runtime preflight status through the API and Detection Lab UI.
  • Add read-only local model asset catalog and Detection Lab model-file selection.
  • Add live model asset detection workflow smoke for configured-YOLO runtime/provenance validation.
  • Add one-click full GIS workflow action for query, derived dataset, QA/QC and export handoff.
  • Add QA/QC workspace result hierarchy and filter density polish.
  • Add Change Detection panel hierarchy and analysis workspace density polish.
  • Add calm workbench layout pass to reduce duplicate navigation, heavy card styling and shell density.
  • Add Data and Map usability layout pass with compact catalog cards and map-first spatial review.
  • Add QA/QC and Exports usability layout pass with calmer evidence review and handoff artifact scanning.
  • Add AI Labs Detection/Segmentation hierarchy and result density polish.
  • Add Export/System handoff hierarchy and provider registry density polish.
  • Add operator-provided real raster/reference detection + QA workflow smoke.
  • Validate the configured building model on a real georeferenced Kempen orthophoto/GeoTIFF with persisted reference vectors and QA/QC metrics.
  • Fix configured-YOLO mixed-case class labels so Building model output matches building domain filters.
  • Persist CRS metadata in raster tile manifests so AI detections can be transformed to WGS84 GeoJSON correctly.
  • Add real-data detection calibration sweep tooling for confidence-threshold and QA/QC metric comparison.
  • Add calibration QA evidence export tooling for false-positive/false-negative inspection artifacts.
  • Add real-data detection quality matrix tooling for model/tile/threshold comparison.
  • Add reproducible Geel/Mol/Turnhout operator sample preparation and multi-sample quality matrix tooling.
  • Run first Geel/Mol/Turnhout persisted detection quality baseline.
  • Add and benchmark a stronger yolov8s building-segmentation runtime model candidate.
  • Add operator-only tile-level YOLO dataset export with overlapping windows and deterministic negative tile retention.
  • Train and benchmark the first tile-level local YOLO candidate on Tower through the persisted QA/QC matrix.
  • Calibrate confidence, IoU and model selection against additional local orthophoto/reference samples beyond Geel/Mol/Turnhout.
  • Add negative/background AOIs to the operator sample corpus and train an expanded local tile-level YOLO candidate.
  • Add a hard-negative model-quality pass with sparse/background AOIs and explicit false-positive scoring.
  • Train a hard-negative-balanced YOLO candidate and rerun dense QA plus background false-positive matrices.
  • Benchmark an external remote-sensing YOLOv8l building candidate as an explicit local model asset.
  • Train and gate the uniquehardneg160e50 YOLOv8s candidate through 7 positive AOIs and 9 hard-negative/background samples.
  • Train and gate an AOI-scale aoi512e80 YOLOv8s candidate to test the 160px training-scale hypothesis.
  • Raise configured-YOLO max_det through YOLO_MAX_DETECTIONS so dense AOIs are not capped at 300 detections before QA/QC.
  • Rerun live dense-AOI calibration after redeploy with YOLO_MAX_DETECTIONS=1000; Westerlo reached 523/1000 detections at lower thresholds and Turnhout reached 822/1000, confirming the old 300 cap is removed.
  • Add configured-YOLO cross-tile duplicate suppression and raw/suppressed calibration evidence fields.
  • Rerun live dense-AOI calibration after redeploy with YOLO_DUPLICATE_IOU_THRESHOLD=0.5; Westerlo 0.25 improved to F1 0.2537313432835821 and Turnhout 0.25 improved to F1 0.14114114114114112, but the candidate remains rejected.
  • Find or train a materially stronger aerial/Kempen building model candidate; geointel-building-yolov8n-expanded160e50-pt is the best current dense-AOI candidate but still too weak and too noisy for a V1 default.
  • Train a higher-capacity local aerial-building detector with stronger positive recall while preserving the hard-negative false-positive gate.
  • Add more diverse positive AOIs and revisit geometry-to-box label strategy before the next default-model training attempt.
  • Build the next candidate gate around better positive AOI coverage, label strategy and hard-negative retention.

Sprint 8 status

  • Detection foundation ORM and migration
  • Detection model registry capability stubs
  • Detection run service boundary
  • Detection API foundation
  • Detection Lab UI foundation
  • Segmentation Lab foundation
  • Configured YOLO local preflight
  • Real YOLO/PyTorch model compatibility smoke

0. Repository Foundation

  • Repo mappenstructuur voorbereiden
  • Productdocumentatie voorbereiden
  • Architectuurdocumentatie voorbereiden
  • Codex build plan voorbereiden
  • Masterprompt voorbereiden
  • Init git repository
  • Voeg echte backend scaffold toe
  • Voeg echte frontend scaffold toe

1. Backend Foundation

  • FastAPI app aanmaken
  • Config systeem aanmaken
  • Database connectie voorbereiden
  • SQLAlchemy models toevoegen
  • Alembic migrations toevoegen
  • Health endpoint toevoegen
  • Tests voor health endpoint toevoegen

2. Database / PostGIS

  • Docker compose met PostgreSQL/PostGIS
  • PostGIS extensie activeren
  • projects tabel
  • areas tabel
  • datasets tabel
  • analysis_runs tabel
  • detections tabel
  • quality_checks tabel
  • exports tabel
  • spatial indexes

3. Frontend Foundation

  • React + TypeScript scaffold
  • Routing
  • Layout met sidebar
  • API client
  • Project pages
  • Map Workbench basis
  • Map layer controls
  • Feature property inspector
  • Selected area display

4. Project & Area API

  • POST /projects
  • GET /projects
  • GET /projects/{id}
  • POST /projects/{id}/areas
  • GET /projects/{id}/areas
  • GeoJSON validatie

5. Dataset Manager

  • Upload endpoint
  • Storage paths
  • Raster metadata extraction
  • Vector metadata extraction
  • Dataset list UI
  • Dataset detail UI

6. Raster Core

  • Rasterio metadata reader
  • Raster preview generation
  • Clip raster by area
  • Tile raster by area
  • Save tile metadata

7. Vector Core

  • GeoPandas importer
  • CRS detection
  • CRS transformation
  • Geometry validation
  • Clip vector by area
  • Store features in PostGIS

8. Reference Data

  • OSM fetcher als fallback
  • GRB integration research verwerken in code
  • Reference dataset cache
  • Reference layer viewer

9. Detection Lab

  • YOLO wrapper
  • Model config
  • Inference job
  • Pixel bbox naar geo polygon
  • Detections opslaan
  • Detection UI
  • GeoJSON export

10. QA/QC Lab

  • Spatial matching
  • IoU berekening
  • Precision/recall/F1
  • False positive layer
  • False negative layer
  • QA dashboard
  • QA export foundation

11. Segmentation Lab

  • Segmentation service design
  • Mask artifact path convention
  • Polygonize masks
  • Segmentatiekaartlaag

12. Change Detection

  • Compare two runs
  • Added/removed objects
  • Change stats
  • Change layer

13. Tests

  • Unit tests GIS helpers
  • API tests
  • DB/migration smoke tests
  • Raster fixture tests
  • Vector fixture tests
  • QA/QC tests

14. Portfolio Release

  • Demo dataset voorbereiden
  • Demo workflow documenteren
  • Screenshots toevoegen
  • README portfolio sectie
  • Full smoke test

Repo preparation additions

  • Add Data Catalog.
  • Add Analysis Specifications.
  • Add QA/QC Specification.
  • Add Raster Operations Specification.
  • Add Vector Operations Specification.
  • Add Detection Pipeline Specification.
  • Add Segmentation Pipeline Specification.
  • Add Change Detection Specification.
  • Add UI Page Specifications.
  • Add Storage Architecture.
  • Add Demo Scenarios.
  • Add Development Rules.
  • Add Codex phase prompts.

Recommended first Codex build sequence

  • Phase 1: Backend foundation using docs/CODEX_PHASE_1_PROMPT.md.
  • Phase 2: Dataset Manager using docs/CODEX_PHASE_2_PROMPT.md.
  • Phase 3: Detection + QA/QC skeleton using docs/CODEX_PHASE_3_PROMPT.md.

M2 Engineering Package

  • Add ADR decision records.
  • Add RFC placeholders for future modules.
  • Add API/database/event contracts.
  • Add model registry and class catalogs.
  • Add queue architecture.
  • Add acceptance matrix and test catalog.
  • Add Codex M2 build prompts.
  • Start Codex Pass 01 backend foundation.

M4 Autonomous Build Readiness

  • Add M4 autonomous build readiness document.
  • Add M4 sprint board.
  • Add module build contracts.
  • Add acceptance test catalog.
  • Add API example responses.
  • Add job lifecycle contract.
  • Add frontend state and route contracts.
  • Add backend service IO contracts.
  • Add model registry seed specification.
  • Add demo fixture manifest.
  • Add Codex autonomous runbook.
  • Add Codex pass prompts.
  • Add Geel demo fixtures.

Next M5 Preparation

  • Add concrete SQL migration snippets for every core table.
  • Add OpenAPI YAML draft.
  • Add frontend component prop contracts.
  • Add backend unit-test skeleton files.
  • Add frontend test skeleton files.
  • Add live data connector research notes with verified endpoints.

M5 Operational Readiness Checklist

  • CI/CD specification added.
  • Healthcheck contracts added.
  • Observability plan added.
  • Troubleshooting runbook added.
  • Rollback and recovery plan added.
  • Security checklist added.
  • Geospatial validation rules added.
  • Build governance added.
  • Codex pass documents added.
  • Smoke scripts added.
  • M6: implement actual backend foundation.
  • M6: implement database migrations.
  • M6: implement frontend shell.

M8 Codex Day-1 Readiness

  • Add Day 1 master prompt.
  • Add pass-by-pass Day 1 prompts.
  • Add autonomy boundaries.
  • Add failure recovery playbook.
  • Add quality gate matrix.
  • Add operator checklist.
  • Add smoke script scaffold.
  • Let Codex execute Day 1 implementation passes.

M10 Ultra Preparation

  • Add autonomous build charter.
  • Add Codex start-here guide.
  • Add M10 master autonomous prompt.
  • Add pass sequence.
  • Add geometry and CRS contracts.
  • Add error taxonomy.
  • Add feature flag strategy.
  • Add model adapter guide.
  • Add QA/QC matching algorithm.
  • Add frontend state machine.
  • Add implementation ticket index and tickets.
  • Add API example payloads.
  • Add final pre-Codex checklist.

Current Workbench UI

  • Replace the one-page workflow panel stack with a task-based workbench shell.
  • Add persistent project/AOI/dataset/layer context.
  • Move selected dataset details into a persistent inspector.
  • Deploy the shell refactor to Tower and run live browser smoke on port 1202.
  • Polish Data, Map and AI Labs workspaces.
  • Polish QA/QC and Exports workspaces.
  • Add selected-object inspector detail tabs for project, AOI, dataset, QA check, export and AI run context.
  • Improve map/dataset selection ergonomics from the workbench canvas and inspector.
  • Improve populated Data/Exports readability after a demo workflow run.
  • Improve live visual shell width, scroll behavior and Map workspace layout at 1280px.
  • Add export history filtering controls for long-running demo environments.
  • Add a safe export retention/cleanup command for demo environments.
  • Add a live dry-run maintenance smoke for demo export cleanup.
  • Add browser screenshot artifact automation for visual regression handoff.
  • Add backend error-envelope audit for expected user-error paths.
  • Expand golden datasets beyond the original single building QA fixture pair.
  • Add workbench visual polish pass for command bar, panel surfaces, empty states and mobile nav density.
  • Add map/result overlay ergonomics for active layer provenance and feature property summaries.
  • Add export/report handoff polish for artifact readiness, action grouping and export provenance.
  • Polish lightweight HTML project report readability, print styling and handoff sections.
  • Add Map empty-state quick actions for ready vector datasets.
  • Add Data catalog role-density polish for reference/candidate/source scanning.
  • Add Data catalog action polish for map, metadata, export and QA affordances.
  • Add QA/QC handoff polish for candidate/reference context and persisted results.
  • Add QA/QC metric card polish for precision, recall, F1, IoU and error counts.
  • Add mobile overflow hardening for workbench navigation, inspector and long QA identifiers.
  • Add QA/QC result filtering and density controls for long-running demo projects.
  • Add Overview workflow guidance for the V1 project -> data -> map -> QA/AI -> export path.
  • Audit populated demo workflow and tighten complete-state Overview guidance copy.
  • Make Overview workflow rail Map/Export clicks preserve useful dataset context.
  • Add latest handoff artifact cards to the Export Center for report, metadata and GeoJSON outputs.
  • Add QA/QC evidence drilldown for selected checks, false-positive/negative evidence and provenance JSON.
  • Add raster pipeline readiness and guardrail surfaces for metadata, CRS, preview, tile manifest and clip-AOI handoff.
  • Add useful default dataset context so Data, Map and Exports are immediately usable after project/demo load.
  • Make raster tile handoff to Detection Lab auto-select the configured YOLO run form.
  • Add AI Lab run-readiness checks for Detection and Segmentation before job submission.
  • Add AI Lab action guardrails so explicit fixture models are not exposed as normal operator runs.
  • Add persisted vector area selection from the Map workspace with bbox extract and GeoJSON download.
  • Persist map area selections as Export Center handoff artifacts.
  • Persist map area selections as reusable derived vector datasets indexed into vector_features.
  • Add Map workspace QA/QC shortcut for saved derived selection datasets.
  • Add Map workspace QA/QC evidence drilldown handoff for saved selection comparisons.
  • Persist QA/QC feature-level evidence for matches, false positives and false negatives.
  • Render persisted QA/QC feature-level evidence as Map workspace overlays.
  • Add safe local YOLO model env configuration helper for Unraid/Tower runtime activation.
  • Harden configured YOLO inference for single-band raster tiles and wrapped runtime errors.
  • Add operator-only YOLO dataset export and local training-smoke wrapper for real sample calibration.
  • Train/evaluate a small local GeoIntel building-detector smoke from the current operator samples and reject it because QA/QC did not improve.
  • Add operator-only tile-level YOLO dataset export with overlapping windows and deterministic negative tile retention.
  • Run tile-level training on Tower and accept/reject the resulting local model through the persisted QA/QC matrix.
  • Train/evaluate a YOLOv8s hard-negative local building-detector candidate on Tower and keep it inactive because hard-negative false positives remain.
  • Add an operator-facing local model catalog/activation workflow with SHA256, active model status and explicit threshold guidance.
  • Block silent local model asset auto-selection in Detection Lab.
  • Add structured raster tile manifest handoff into Detection Lab with linked preflight visibility.
  • Add full threshold calibration comparison UX so detection runs can compare candidate thresholds before promotion.
  • Add guided in-app detection calibration runner for explicit threshold sweeps.
  • Link guided calibration rows to the QA evidence map.
  • Add guided calibration summary export from the Detection Lab.
  • Allow the evidence bundle script to consume Detection Lab calibration summary exports.
  • Add a local browser-summary QA evidence bundle smoke using mocked canonical evidence responses.
  • Add a multi-AOI calibration evidence portfolio convention for model-review handoff.
  • Run the first live multi-AOI calibration evidence portfolio on Tower for Geel, Mol and Turnhout.
  • Run fresh positive-AOI matrix coverage for Balen, Herentals and Westerlo.
  • Preserve model/tile provenance in calibration evidence bundle summaries.
  • Prevent same-threshold calibration evidence responses from overwriting each other in multi-model portfolios.
  • Add a model promotion decision report that combines positive-AOI score with hard-negative false-positive pressure.
  • Train and reject a YOLOv8s hard-negative r8 partial candidate after 12 CPU epochs through the full positive/background promotion gate.
  • Finish and reject the full YOLOv8s hard-negative r8 e60 candidate through the same promotion gate.
  • Add more AOIs after the tile-level baseline so the next local model attempt is not limited to Geel/Mol/Turnhout.
  • Add negative/background AOIs so the next tile dataset is not all positive tiles.
  • Improve positive training coverage/label quality before the next higher-capacity model attempt; simply extending the same hardneg r8 run is not enough.

Sprint 146 - Operator YOLO dataset quality audit

  • Add a dataset/label-quality audit for generated operator YOLO tile datasets.
  • Report sample coverage, validation coverage, repeated hard-negative pressure and YOLO label area integrity.
  • Wire the audit script into the readiness syntax gate.
  • Use live audit output to decide whether the next model pass needs more positive AOIs, label cleanup or unique hard negatives.
  • Add more unique background/hard-negative AOIs before repeating hard-negative-balanced YOLO training.
  • Keep yolo-building-tile-expanded160 as the clean current training baseline; avoid promoting r4/r8 repeat-heavy datasets as defaults.
  • Regenerate Tower operator samples, export a new unique-hard-negative tile dataset and rerun the dataset audit before training.

Sprint 147 - Unique hard-negative AOI expansion

  • Expand the documented operator background candidates from 3 to 9 unique AOIs.
  • Keep every new background AOI explicit, allow_empty_reference=True, and sample_role='background_candidate'.
  • Add test coverage for minimum background candidate count, unique centers and regional spread.
  • Prepare the new samples on Tower and build a fresh hard-negative tile dataset.
  • Rebuild Tower all-in-one image so the newly copied operator scripts are available inside /app/scripts without docker cp.
  • Fix YOLO preflight CLI so it respects Tower .env runtime configuration.
  • Train a new candidate from yolo-building-tile-uniquehardneg160 and run the positive/background promotion gates before activating it.